Classes | |
struct | stats_t |
Public Member Functions | |
PPair (ushort s1_=0, ushort e1_=0, ushort s2_=0, ushort e2_=0) | |
bool | operator< (PPair const &other) const |
size_t | len1 () const |
size_t | len2 () const |
bool | includes (PPair const &o) const |
Public Attributes | |
uint64_t | p1 |
uint64_t | p2 |
ushort | s1 |
ushort | e1 |
ushort | s2 |
ushort | e2 |
int | parent |
struct PPair::stats_t | stats |
Definition at line 68 of file try-align.cc.
PPair::PPair | ( | ushort | s1_ = 0 , |
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ushort | e1_ = 0 , |
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ushort | s2_ = 0 , |
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ushort | e2_ = 0 | |||
) | [inline] |
Definition at line 120 of file try-align.cc.
bool PPair::includes | ( | PPair const & | o | ) | const [inline] |
size_t PPair::len1 | ( | ) | const [inline] |
size_t PPair::len2 | ( | ) | const [inline] |
bool PPair::operator< | ( | PPair const & | other | ) | const [inline] |
Definition at line 125 of file try-align.cc.
References e1, e2, s1, s2, PPair::stats_t::score, and stats.
ushort PPair::e1 |
Definition at line 72 of file try-align.cc.
Referenced by includes(), len1(), main(), and operator<().
ushort PPair::e2 |
Definition at line 72 of file try-align.cc.
Referenced by includes(), len2(), main(), and operator<().
uint64_t PPair::p1 |
Definition at line 70 of file try-align.cc.
uint64_t PPair::p2 |
Definition at line 70 of file try-align.cc.
int PPair::parent |
Definition at line 73 of file try-align.cc.
ushort PPair::s1 |
Definition at line 72 of file try-align.cc.
Referenced by includes(), len1(), main(), and operator<().
ushort PPair::s2 |
Definition at line 72 of file try-align.cc.
Referenced by includes(), len2(), main(), and operator<().
struct PPair::stats_t PPair::stats |
Referenced by main(), and operator<().