PPair Struct Reference

Collaboration diagram for PPair:

Collaboration graph
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List of all members.

Classes

struct  stats_t

Public Member Functions

 PPair (ushort s1_=0, ushort e1_=0, ushort s2_=0, ushort e2_=0)
bool operator< (PPair const &other) const
size_t len1 () const
size_t len2 () const
bool includes (PPair const &o) const

Public Attributes

uint64_t p1
uint64_t p2
ushort s1
ushort e1
ushort s2
ushort e2
int parent
struct PPair::stats_t stats


Detailed Description

Definition at line 68 of file try-align.cc.


Constructor & Destructor Documentation

PPair::PPair ( ushort  s1_ = 0,
ushort  e1_ = 0,
ushort  s2_ = 0,
ushort  e2_ = 0 
) [inline]

Definition at line 120 of file try-align.cc.


Member Function Documentation

bool PPair::includes ( PPair const &  o  )  const [inline]

Definition at line 134 of file try-align.cc.

References e1, e2, s1, and s2.

size_t PPair::len1 (  )  const [inline]

Definition at line 132 of file try-align.cc.

References e1, and s1.

size_t PPair::len2 (  )  const [inline]

Definition at line 133 of file try-align.cc.

References e2, and s2.

bool PPair::operator< ( PPair const &  other  )  const [inline]

Definition at line 125 of file try-align.cc.

References e1, e2, s1, s2, PPair::stats_t::score, and stats.


Member Data Documentation

ushort PPair::e1

Definition at line 72 of file try-align.cc.

Referenced by includes(), len1(), main(), and operator<().

ushort PPair::e2

Definition at line 72 of file try-align.cc.

Referenced by includes(), len2(), main(), and operator<().

uint64_t PPair::p1

Definition at line 70 of file try-align.cc.

uint64_t PPair::p2

Definition at line 70 of file try-align.cc.

Definition at line 73 of file try-align.cc.

ushort PPair::s1

Definition at line 72 of file try-align.cc.

Referenced by includes(), len1(), main(), and operator<().

ushort PPair::s2

Definition at line 72 of file try-align.cc.

Referenced by includes(), len2(), main(), and operator<().

Referenced by main(), and operator<().


The documentation for this struct was generated from the following file:

Generated on Thu Jul 6 00:31:56 2017 for Moses by  doxygen 1.5.9