, including all inherited members.
  | arrayEnd() const | sapt::TSA< TOKEN > |  [inline] | 
  | ArrayEntry typedef | sapt::TSA< TOKEN > |  | 
  | arrayStart() const | sapt::TSA< TOKEN > |  [inline] | 
  | aveIndexEntrySize() const | sapt::TSA< TOKEN > |  [inline] | 
  | bitset_pointer typedef | sapt::TSA< TOKEN > |  | 
  | BitSetCachingThreshold | sapt::TSA< TOKEN > |  [protected] | 
  | bsc | sapt::TSA< TOKEN > |  | 
  | BSC_t typedef | sapt::TSA< TOKEN > |  | 
  | corpus | sapt::TSA< TOKEN > |  [protected] | 
  | corpusSize | sapt::TSA< TOKEN > |  [protected] | 
  | dataEnd() const | sapt::TSA< TOKEN > |  | 
  | dump(std::ostream &out, TokenIndex const &T) const | sapt::TSA< TOKEN > |  | 
  | endArray | sapt::TSA< TOKEN > |  [protected] | 
  | fillBitSet(std::vector< TOKEN > const &phrase, bdBitset &dest) const | sapt::TSA< TOKEN > |  | 
  | fillBitSet(TOKENconst *key, size_t keyLen, bdBitset &dest) const | sapt::TSA< TOKEN > |  | 
  | find(TOKENconst *start, size_t len) const | sapt::TSA< TOKEN > |  [inline] | 
  | find_end(char const *lo, char const *const upX, TOKENconst *const refStart, int refLen, size_t d) const | sapt::TSA< TOKEN > |  [protected] | 
  | find_longer(char const *lo, char const *const upX, TOKENconst *const refStart, int refLen, size_t d) const | sapt::TSA< TOKEN > |  [protected] | 
  | find_start(char const *lo, char const *const upX, TOKENconst *const refStart, int refLen, size_t d) const | sapt::TSA< TOKEN > |  [protected] | 
  | findBranches(TOKENconst *base, bitvector const &terminals, std::vector< tree_iterator > &dest) const | sapt::TSA< TOKEN > |  | 
  | findTree(TOKENconst *treeStart, TOKENconst *treeEnd, bitvector const *filter) const | sapt::TSA< TOKEN > |  | 
  | getBitSet(TOKENconst *startKey, size_t keyLen) const | sapt::TSA< TOKEN > |  | 
  | getCorpus() const | sapt::TSA< TOKEN > |  | 
  | getCorpusSize() const | sapt::TSA< TOKEN > |  | 
  | getCounts(char const *p, char const *const q, count_type &sids, count_type &raw) const  | sapt::mmTSA< TOKEN > |  [inline, virtual] | 
  | getSequence(::uint64_t pid, TokenIndex const &V) const | sapt::TSA< TOKEN > |  | 
  | getSequence(::uint64_t pid) const | sapt::TSA< TOKEN > |  | 
  | getSequenceId(typename std::vector< TOKEN >::const_iterator const &pstart, typename std::vector< TOKEN >::const_iterator const &pstop) const | sapt::TSA< TOKEN > |  | 
  | getSequenceId(TOKENconst *t, ushort plen) const | sapt::TSA< TOKEN > |  | 
  | getSequenceLength(::uint64_t) const | sapt::TSA< TOKEN > |  | 
  | getSequenceStart(::uint64_t) const | sapt::TSA< TOKEN > |  | 
  | index | sapt::mmTSA< TOKEN > |  | 
  | indexSize | sapt::TSA< TOKEN > |  [protected] | 
  | lower_bound(typename std::vector< TOKEN >::const_iterator const &keyStart, typename std::vector< TOKEN >::const_iterator const &keyStop) const | sapt::TSA< TOKEN > |  | 
  | lower_bound(TOKENconst *keyStart, TOKENconst *keyStop) const | sapt::TSA< TOKEN > |  | 
  | lower_bound(TOKENconst *keyStart, int keyLen) const | sapt::TSA< TOKEN > |  | 
  | markOccurrences(char const *lo, char const *up, size_t len, bitvector &bitset, bool markOnlyStartPosition) const | sapt::TSA< TOKEN > |  | 
  | mmTSA() | sapt::mmTSA< TOKEN > |  [inline] | 
  | mmTSA(std::string fname, Ttrack< TOKEN > const *c) | sapt::mmTSA< TOKEN > |  [inline] | 
  | numTokens | sapt::TSA< TOKEN > |  [protected] | 
  | open(std::string fname, typename boost::shared_ptr< Ttrack< TOKEN > const  > c) | sapt::mmTSA< TOKEN > |  [inline] | 
  | rawCnt(char const *p, char const *const q) const  | sapt::mmTSA< TOKEN > |  [inline, virtual] | 
  | rawCnt2(TOKENconst *keyStart, size_t keyLen) const | sapt::TSA< TOKEN > |  | 
  | readEntry(char const *p, tsa::ArrayEntry &I) const | sapt::TSA< TOKEN > |  | 
  | readOffset(char const *p, char const *q, uint16_t &offset) const  | sapt::mmTSA< TOKEN > |  [inline, virtual] | 
  | readOffset(char const *p, char const *q,::uint64_t &offset) const  | sapt::mmTSA< TOKEN > |  [inline, virtual] | 
  | readSid(char const *p, char const *q, id_type &sid) const  | sapt::mmTSA< TOKEN > |  [inline, virtual] | 
  | readSid(char const *p, char const *q,::uint64_t &sid) const  | sapt::mmTSA< TOKEN > |  [inline, virtual] | 
  | sanityCheck() const  | sapt::mmTSA< TOKEN > |  | 
  | sanityCheck1() const | sapt::TSA< TOKEN > |  | 
  | setBits(char const *startRange, char const *endRange, boost::dynamic_bitset< uint64_t > &bs) const | sapt::TSA< TOKEN > |  | 
  | setTokenBits(char const *startRange, char const *endRange, size_t len, bitvector &bs) const | sapt::TSA< TOKEN > |  | 
  | sntCnt(char const *p, char const *const q) const  | sapt::mmTSA< TOKEN > |  | 
  | startArray | sapt::TSA< TOKEN > |  [protected] | 
  | suffixAt(char const *p, TokenIndex const *V=NULL, size_t maxlen=0) const | sapt::TSA< TOKEN > |  | 
  | suffixAt(ArrayEntry const &I, TokenIndex const *V=NULL, size_t maxlen=0) const | sapt::TSA< TOKEN > |  | 
  | Token typedef | sapt::TSA< TOKEN > |  | 
  | tree_iterator typedef | sapt::mmTSA< TOKEN > |  | 
  | TSA_tree_iterator< TKN > class | sapt::TSA< TOKEN > |  [friend] | 
  | TSA_tree_iterator< TOKEN > class | sapt::mmTSA< TOKEN > |  [friend] | 
  | upper_bound(typename std::vector< TOKEN >::const_iterator const &keyStart, typename std::vector< TOKEN >::const_iterator const &keyStop) const | sapt::TSA< TOKEN > |  | 
  | upper_bound(TOKENconst *keyStart, int keyLength) const | sapt::TSA< TOKEN > |  | 
  | ~TSA() | sapt::TSA< TOKEN > |  [inline, virtual] |